Publicado

2019-01-01

El dominio STK de la proteína de resistencia a la bacteriosis vascular de yuca RXAM1 interactúa con una E3 Ubiquitin Ligasa

The STK domain of the cassava bacterial blight resistance protein RXam1 interacts with an E3 Ubiquitin Ligase

DOI:

https://doi.org/10.15446/abc.v24n1.70821

Palabras clave:

Bacteriosis vascular, doble híbrido, interacción, inmunidad vegetal, Xanthomonas axonopodis pv. manihotis (Xam) (es)
Bacterial blight, interaction, plant immunity, Xanthomonas axonopodis pv. manihotis (Xam), yeast Two-hybrid (en)

Autores/as

  • Juliana Gil Universidad Nacional de Colombia
  • Camilo Ernesto López Carrascal Universidad Nacional de Colombia

La yuca (Manihot esculenta) representa el pilar de la seguridad alimentaria para cerca de mil millones de personas, principalmente en las zonas tropicales. Uno de los factores limitantes de la producción de yuca es la bacteriosis vascular causada por la bacteria Xanthomonas axonopodis pv. manihotis (Xam). Recientemente se identificó el gen RXam1 el cual confiere resistencia parcial de yuca a cepas de Xam. RXam1 codifica una proteína con un dominio LRR (Leucine Rich Repeats) extracelular y un dominio STK (Serina Treonina Kinasa) citoplasmático; estas proteínas son conocidas como RLKs (Receptor Like Kinases). En este estudio se realizó el tamizaje de una librería de ADNc de yuca mediante doble híbrido de levadura para identificar las posibles proteínas que interactúan con el dominio STK de RXam1. El tamizaje de 3x108 clones permitió identificar y confirmar cinco clones de ellos los cuales corresponden al mismo gen, el cual codifica para una proteína que presenta un dominio central de dedos de zinc CHY, seguido por un dominio C-terminal “RING finger” y un “Zinc ribbon” el cual fue denominado CRFE3-1 (Cassava RING Finger E3 ligase). La interacción entre STK y CRFE3-1 fue altamente especifica ya que se demostró también por doble híbrido que STK no interactúa con una E3 ligasa de Arabidopsis, altamente similar a CRFE3-1, así como tampoco CRFE3-1 interactúa con el dominio STK de un RLK de lechuga similar a RXam1. La identificación de CRFE3-1 sugiere que mecanismos de degradación proteica son importantes para regular la actividad de RXam1.

Cassava (Manihot esculenta) represents food security support for nearly one billion people, mainly in the tropics. One of the limiting factors of cassava’s production is cassava bacterial blight, caused by the bacterium Xanthomonas axonopodis pv. manihotis (Xam). Recently, the RXam1 gene was identified, which confers partial resistance to some Xam strains. RXam1 encodes a protein with an extracellular LRR (Leucine Rich Repeats) domain and a cytoplasmic STK (Serine Threonine Kinase) domain; these proteins are known as RLK (Receptor-like Kinases). In this study, a cassava cDNA library was screened using a yeast Two-hybrid assay to identify possible proteins interacting with the STK domain of RXam1. Screening of 3x108 clones allowed identifying and confirming five of them, which correspond to the same gene, and code for a protein that has a core domain of zinc fingers CHY, followed by a C-terminal “RING finger” domain and a “Zinc ribbon”. This gene was called CRFE3-1 (Cassava RING Finger E3 ligase). It was also demonstrated by yeast Two- hybrid that STK does not interact with an E3 ligase of Arabidopsis that is highly like CRFE3-1. CRFE3-1 did not show interaction with the STK domain of an RLK of lettuce related to RXam1, indicating a highly specific interaction between cassava RXam1 STK and CRFE3-1. The identification of CRFE3-1 suggests that protein degradation mechanisms are important to regulate the activity of RXam1.

Referencias

Baggs E, Dagdas G, Krasileva K V. NLR diversity, helpers and integrated domains: making sense of the NLR Identity. Curr Opin Plant Biol. 2017;38:59-67.Doi:10.1016/j.pbi.2017.04.012

Bigeard J, Colcombet J, Hirt H. Signaling Mechanisms in Pattern-Triggered Immunity (PTI). Mol Plant. 2015;8(4):521-539. Doi:10.1016/j.molp.2014.12.022

Boutrot F, Zipfel C. Function, Discovery and Exploitation of Plant Pattern Recognition Receptors for Broad-Spectrum Disease Resistance. Annu Rev Phytopathol. 2017;55:257-286.Doi: 10.1146/annurev-phyto-080614-120106

Cantu D, Yang B, Ruan R, Li K, Menzo V, Fu D, Chern M, Ronald P, Dubcovsky J. Comparative analysis of proteinprotein interactions in the defense response of rice and wheat. BMC Genomics. 2013;14:166.Doi: 10.1186/1471-2164-14-166

Ceballos H, de la Cruz G. Cassava Taxonomy and Morphology. In Ospina B, Ceballos H, editores. Cassava in the third millennium: modern production, processing, use, and marketing systems. Cali, CO: Centro Internacional de Agricultura Tropical (CIAT); Latin American and Caribbean Consortium to support Cassava Research and Development (CLAYUCA); Technical Centre for Agricultural and Rural Cooperation (CTA); 2012. p. 15-28.

Cheng YT, Li X. Ubiquitination in NB-LRR-mediated immunity. Curr Opin Plant Biol. 2012;15(4):392-399. Doi:10.1016/j.pbi.2012.03.014.

Clontech. Matchmaker ® Gold Yeast Two-Hybrid System User Manual. 2009. Disponible en: http://clontech.com/MX/Products/Protein_Interactions_and_Profiling/Yeast_Two-Hybrid/Matchmaker_Gold_Yeast_Two-Hybrid_System#.

Couto D, Zipfel C. Regulation of pattern recognition receptor signaling in plants. Nat Rev Immunol. 2016; 16(9):537-52. Doi:10.1038/nri.2016.77.

Craig A, Ewan R, Mesmar J, Gudipati V, Sadanandom A. E3 ubiquitin ligases and plant innate immunity. J Exp Bot. 2009;60(4):1123-1132. Doi:10.1093/jxb/erp059.

Dellaporta S, Wood J, Hicks J. A Plant D N A Minipreparation: Version II. Plant Mol Biol Report. 1983;4(1):19-21.

Deslandes L, Rivas S. Catch me if you can: bacterial effectors and plant targets. Trends Plant Sci. 2012;17(11):644-655. Doi:10.1016/j.tplants.2012.06.011.

Diaz P, Herrera M, Ochoa JC, Medina A, Prias M, Verdier V, Chavarriaga P, López C. The overexpression of RXam1, a cassava gene coding for an RLK confers disease resistance to Xanthomonas axonopodis pv. manihotis. Planta.2018;247(4):1031-1042. Doi:10.1007/s00425-018-2863-4

FAO. El estado de la seguridad alimentaria y la nutrición en el mundo 2017. Disponible en: www.fao.org/3/a-I7695s.pdf

González C, López C. A. Cassava DNA Library Construction: One Tool for Biotechnological Development of the Crop. Acta Biol Colomb. 2008;13(2):189-201.

Jones J, Vance R, Dangl J. Intracellular innate immune surveillance devices in plants and animals. Science. 2016;354:117-125. Doi:10.1126/science.aaf6395.

Jorge V, Fregene M, Duque MC, Bonierbale M, Tohme J, Verdier V. Genetic mapping of resistance to bacterial blight disease in cassava. Theor Appl Genet. 2000;101(5-6):865-872.

Kadota Y, Shirasu K, Zipfel C. Regulation of the NADPH Oxidase RBOHD During Plant Immunity. Plant Cell Physiol. 2018;56(8):1472-1480. Doi:10.1093/pcp/pcv063.

Katoh K, Standley DM. MAFFT multiple sequence alignment software version 7: improvements in performance and usability, Mol. Biol. Evol. 2014; 30:772-780. Doi:10.1093/molbev/mst010.

Li J, Gao J, Han L, Zhan g Y, Guan W, Zhou L, Yu Y, Han W. Development of a membrane- anchored ligand and receptor yeast two-hybrid system for ligand- receptor interaction identification. Sci Rep. 2016;6:35631. Doi:10.1038/srep35631.

Li L, Li M, Yu L, Zhou, Z Liang X, Liu Z, Cai G, Gao, Zhang X, Wang Y, Chen S, Zhou J. The FLS2-Associated Kinase BIK1 Directly Phosphorylates the NADPH Oxidase RbohD to Control Plant Immunity. Cell Host Microbe. 2014;15(3):329-338. Doi:10.1016/j.chom.2014.02.009.

Lozano J, Sequeira L. Bacterial Blight of cassava in Colombia: epidemiology and control. Phytopathology. 1974; 64: 83-88. Doi:10.1094/Phyto-64-83

Lozano JC. Cassava Bacterial Blight: A manageable Disease. Plant Disease. 1986; 70: 1089.

Mazzucotelli E, Belloni S, Marone D, Leonardis A, Guerra D, Fonzo, N Cattivelli L, Mastrangelo A. The E3 Ubiquitin Ligase Gene Family in Plants: Regulation by Degradation. Curr Genomics. 2006;7(8):509-522.

Monaghan J, Zipfel C. Plant pattern recognition receptor complexes at the plasma membrane. Curr Opin Plant Biol. 2012;15(4):1-9. Doi:10.1016/j.pbi.2012.05.006.

Muñoz A, Perez A, Gomez-Cano F, Gil J, Michelmore R, Bernal A, Szurek B, Lopez C. RNAseq analysis of cassava reveals similar plant responses upon infection with pathogenic and nonpathogenic strains of Xanthomonas axonopodis pv. manihotis. Plant Cell Rep. 2014;33(11):1901-1912. Doi:10.1007/s00299-014-1667-7.

Mysore KS, Ryu CM. Nonhost resistance. How much do we know? Trends Plant Sci. 2004;9(2):97-104.

Olsen KM, Schaal B. Evidence on the origin of cassava: Phylogeography of Manihot esculenta. Proc Natl Acad Sci USA. 1999;96(10):5586-5591. Doi:10.1073/pnas.96.10.5586.

Song W, Wang G, Chen L, Kim H, Pi L, Holsten T, Wang B, Williams C, Zhai W, Zhu L, Fauquet, Ronald P. A receptor kinase-like protein encoded by the rice disease resistance gene, Xa21. Science. 1995;270(5243):1804-1806.

Soto JC, Ortiz JF, Perlaza-Jiménez L, Vásquez A, Lopez-Lavalle L, Mathew B, Léon J, Bernal A, Ballvora A, López C. A genetic map of cassava (Manihot esculenta Crantz ) with integrated physical mapping of immunity-related genes. BMC Genomics. 2015;16:190. doi:10.1186/s12864-015-1397-4.

Soto J, Mora R, Mathew B, Léon J, Jens, Gomez-Cano F, Ballvora A, López, C. Major Novel QTL for Resistance to Cassava Bacterial Blight Identified through a Multi-Environmental Analysis. Front Plant Sci. 2017;8:1169. doi:10.3389/fpls.2017.01169.

Stamatakis A. RAxML version 8: A tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 2014; 30(9):1312-1313.Doi: 10.1093/bioinformatics/btu033

Stone SL, Hauksdottir H, Troy A, Herschleb J, Kraft E, Callis J. Functional Analysis of the RING-Type Ubiquitin Ligase Family of Arabidopsis. Plant Physiol. 2005;137(1):13-30. Doi:10.1104/pp.104.052423.carrying.

Suter B, Zhang X, Pesce CG, Mendelsohn AR, Biron DG, Suter B. Next-Generation Sequencing for Binary Protein – Protein Interactions. Front Genet. 2015;6:346. Doi:10.3389/fgene.2015.00346.

Tang D, Wang G, Zhou J. Receptor Kinases in Plant-Pathogen Interactions : More Than Pattern Recognition. Plant Cell. 2017;29(4):618-637. Doi:10.1105/tpc.16.00891.

Toruño TY, Stergiopoulos I, Coaker G. Plant Pathogen Effectors: Cellular Probes Interfering with Plant Defenses in Spatial and Temporal Manners. Annu Rev Phytopathol. 2016;54:419-441. Doi:10.1146/annurev-phyto-080615-100204.

Trujillo CA, Ochoa JC, Mideros F, Restrepo S, López C, Bernal A. A Complex Population Structure of the Cassava Pathogen. Microb Ecol. 2014;68(1):155-167. Doi:10.1007/s00248-014-0411-8.

Trujillo M, Ichimura K, Casais C, Shirasu K. Negative Regulation of PAMP-Triggered Immunity by an E3 Ubiquitin Ligase Triplet in Arabidopsis. Curr Biol. 2008;18(18):1396-1401. Doi:10.1016/j.cub.2008.07.085.

Trujillo M, Shirasu K. Ubiquitination in plant immunity. Curr Opin Plant Biol. 2010;13(4):402-408. Doi:10.1016/j.pbi.2010.04.002.

Trujillo M. News from the PUB: plant U-box type E3 ubiquitin ligases. J Exp Bot. 2018;69(3):371-384. Doi:10.1093/jxb/erx411

Verdier V, López C, Bernal A. Cassava Bacterial Blight caused by Xanthomonas axonopodis pv. manihotis. E Ospina B, Ceballos H,editores. Cassava in the third millennium: modern production, processing, use, and marketing systems. Cali,CO: Centro Internacional de Agricultura Tropical (CIAT); Latin American and Caribbean Consortium to support Cassava Research and Development (CLAYUCA); Technical Centre for Agricultural and Rural Cooperation (CTA); 2012. p. 200-212.

Wang Y, Pi L, Chen X, Chakrabarty P, Jiang J, Leon A, Liu G, Li L, Benny U, Oard J, Ronald P, Song W. Rice XA21 Binding Protein 3 Is a Ubiquitin Ligase Required for Full Xa21-Mediated Disease Resistance. Plant Cell. 2006;18(12):3635-3646. Doi:10.1105/tpc.106.046730.

Yamada K, Yamaguchi K, Shirakawa T, Nakagami H, Akira M, Kazuya I, Masayuki F, Narusaka M, Narusaka Y, Kazuya I, Kobayashi Y, Matsui H, Nomura Y, Nomoto M, Tada Y, Fukao Y, Fukamizo T, Tsuda K, Shirasu K, Shibuya N, Kawasaki T. The Arabidopsis CERK 1 -associated kinase PBL 27 connects chitin perception to MAPK activation. EMBO J. 2016;35(22):2468-2483.

Yu X, Feng B, He P, Shan L. From Chaos to Harmony : Responses and Signaling upon Microbial Pattern Recognition. Annu Rev Phytopathol. 2017;55:109-137.Doi: 10.1146/annurevphyto-080516-035649

Zhang X, Dodds PN, Bernoux M. What Do We Know About NOD-Like Receptors in Plant Immunity? Annu Rev Phytopathol. 2017;55:205-229.Doi: 10.1146/annurevphyto-080516-035250

Cómo citar

APA

Gil, J. & López Carrascal, C. E. (2019). El dominio STK de la proteína de resistencia a la bacteriosis vascular de yuca RXAM1 interactúa con una E3 Ubiquitin Ligasa. Acta Biológica Colombiana, 24(1), 139–149. https://doi.org/10.15446/abc.v24n1.70821

ACM

[1]
Gil, J. y López Carrascal, C.E. 2019. El dominio STK de la proteína de resistencia a la bacteriosis vascular de yuca RXAM1 interactúa con una E3 Ubiquitin Ligasa. Acta Biológica Colombiana. 24, 1 (ene. 2019), 139–149. DOI:https://doi.org/10.15446/abc.v24n1.70821.

ACS

(1)
Gil, J.; López Carrascal, C. E. El dominio STK de la proteína de resistencia a la bacteriosis vascular de yuca RXAM1 interactúa con una E3 Ubiquitin Ligasa. Acta biol. Colomb. 2019, 24, 139-149.

ABNT

GIL, J.; LÓPEZ CARRASCAL, C. E. El dominio STK de la proteína de resistencia a la bacteriosis vascular de yuca RXAM1 interactúa con una E3 Ubiquitin Ligasa. Acta Biológica Colombiana, [S. l.], v. 24, n. 1, p. 139–149, 2019. DOI: 10.15446/abc.v24n1.70821. Disponível em: https://revistas.unal.edu.co/index.php/actabiol/article/view/70821. Acesso em: 6 mar. 2026.

Chicago

Gil, Juliana, y Camilo Ernesto López Carrascal. 2019. «El dominio STK de la proteína de resistencia a la bacteriosis vascular de yuca RXAM1 interactúa con una E3 Ubiquitin Ligasa». Acta Biológica Colombiana 24 (1):139-49. https://doi.org/10.15446/abc.v24n1.70821.

Harvard

Gil, J. y López Carrascal, C. E. (2019) «El dominio STK de la proteína de resistencia a la bacteriosis vascular de yuca RXAM1 interactúa con una E3 Ubiquitin Ligasa», Acta Biológica Colombiana, 24(1), pp. 139–149. doi: 10.15446/abc.v24n1.70821.

IEEE

[1]
J. Gil y C. E. López Carrascal, «El dominio STK de la proteína de resistencia a la bacteriosis vascular de yuca RXAM1 interactúa con una E3 Ubiquitin Ligasa», Acta biol. Colomb., vol. 24, n.º 1, pp. 139–149, ene. 2019.

MLA

Gil, J., y C. E. López Carrascal. «El dominio STK de la proteína de resistencia a la bacteriosis vascular de yuca RXAM1 interactúa con una E3 Ubiquitin Ligasa». Acta Biológica Colombiana, vol. 24, n.º 1, enero de 2019, pp. 139-4, doi:10.15446/abc.v24n1.70821.

Turabian

Gil, Juliana, y Camilo Ernesto López Carrascal. «El dominio STK de la proteína de resistencia a la bacteriosis vascular de yuca RXAM1 interactúa con una E3 Ubiquitin Ligasa». Acta Biológica Colombiana 24, no. 1 (enero 1, 2019): 139–149. Accedido marzo 6, 2026. https://revistas.unal.edu.co/index.php/actabiol/article/view/70821.

Vancouver

1.
Gil J, López Carrascal CE. El dominio STK de la proteína de resistencia a la bacteriosis vascular de yuca RXAM1 interactúa con una E3 Ubiquitin Ligasa. Acta biol. Colomb. [Internet]. 1 de enero de 2019 [citado 6 de marzo de 2026];24(1):139-4. Disponible en: https://revistas.unal.edu.co/index.php/actabiol/article/view/70821

Descargar cita

CrossRef Cited-by

CrossRef citations0

Dimensions

PlumX

Visitas a la página del resumen del artículo

719

Descargas

Los datos de descargas todavía no están disponibles.